BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034B08SP1|AL429859
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1430 1752 0.0
>3x_Contig1430
Length = 7411
Score = 1752 bits (883), Expect = 0.0
Identities = 894/897 (99%), Gaps = 1/897 (0%)
Strand = Plus / Plus
Query: 1 ccagctgcaactaactcagcagctccttccaacatttctgctggtcagactggtggattt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17 ccagctgcaactaactcagcagctccttcca-catttctgctggtcagactggtggattt 75
Query: 61 aacccattggctgatttgactggtgcccgttatgcaggtctcgccaatttgccctcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 aacccattggctgatttgactggtgcccgttatgcaggtctcgccaatttgccctcagct 135
Query: 121 gatatgtttggtccagacggtggcctgaacagcagttacggcgccaatcccgaatccatg 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 136 gatatgtttggtccagacggtggcctgaacagcagtaacggcgccaatcccgaatccatg 195
Query: 181 ctacaaatgttagagaaccccatcttccaatctcaaatgaatgaaatgttgagtaatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctacaaatgttagagaaccccatcttccaatctcaaatgaatgaaatgttgagtaatcca 255
Query: 241 caaatggtcgacttcttgatccaacagaacccccaattacaggctttgggtccgagagcw 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caaatggtcgacttcttgatccaacagaacccccaattacaggctttgggtccgagagca 315
Query: 301 agagatatgttacagagccccttctttagacaaatgatgacagaccctcagatgattaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agagatatgttacagagccccttctttagacaaatgatgacagaccctcagatgattaga 375
Query: 361 cagtcaatgcaaatggccaactcgatgggtatgtctccagatggtgccgcttctgcattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cagtcaatgcaaatggccaactcgatgggtatgtctccagatggtgccgcttctgcattt 435
Query: 421 cctgcgccaggtagtgctagtggggctggtggggctaatgaaactagtacaaatgatgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cctgcgccaggtagtgctagtggggctggtggggctaatgaaactagtacaaatgatgcc 495
Query: 481 gatagtgcagcaacaggtgctgcagcatcttcaacaggccaagctaacccatttgcaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gatagtgcagcaacaggtgctgcagcatcttcaacaggccaagctaacccatttgcaggt 555
Query: 541 ttattcggtgcgactccaggaaatgccgcagcagctaatcccttcgctggattattccca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttattcggtgcgactccaggaaatgccgcagcagctaatcccttcgctggattattccca 615
Query: 601 ggtggtcaacaacctcagttcaaccaagagcttttagctagtatgttcggtgggaactcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggtggtcaacaacctcagttcaaccaagagcttttagctagtatgttcggtgggaactcc 675
Query: 661 aacgccaccggtgctgctccagctgtagataacagaccaccggaagaacgttacgagtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aacgccaccggtgctgctccagctgtagataacagaccaccggaagaacgttacgagtct 735
Query: 721 caactcagacaactaaacgatatgggattctttgatttcgatagaaatgttgctgctcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 caactcagacaactaaacgatatgggattctttgatttcgatagaaatgttgctgctcta 795
Query: 781 agacgtgccggaggatctgtccagggtgctcttgacgcattgttgaacggcgacgtgtaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 agacgtgccggaggatctgtccagggtgctcttgacgcattgttgaacggcgacgtgtaa 855
Query: 841 tggtttcctttgtatccactcccctctaggcctttgctcctgatgtgacccatatcg 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tggtttcctttgtatccactcccctctaggcctttgctcctgatgtgacccatatcg 912
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4603
Number of Sequences: 1807
Number of extensions: 4603
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)